EnhancerDB
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  3. rs542593778[chr2:224599945]
Enhancers that have rs542593778[chr2:224599945]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 224585628 224603006 enh19263
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Uterus Epithelial (MCF-7) Kidney Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Breast Spleen Muscle (Myotube) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs542593778[chr2:224599945]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 224599931 224599946 HNF4G JASPAR yes 81282638
chr2 224599932 224599946 RXRB JASPAR yes 81282639
chr2 224599932 224599946 RXRG JASPAR yes 81282640
chr2 224599932 224599947 HNF4A JASPAR yes 81282641
Genes associated with rs542593778[chr2:224599945], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More