EnhancerDB
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  3. rs542594830[chr1:155197502]
Enhancers that have rs542594830[chr1:155197502]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 155186185 155200282 enh647
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Prostate (RWPE1) Blood (T-cell) Bone (Osteoblast) Blood (OCI-LY7) Stomach Placenta Colon (HCT116) Blood (Karpas-422) Lung (PC-9) Pancreas Uterus Thymus Epithelial (MCF-7)
Transcript factors that have rs542594830[chr1:155197502]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 155191923 155197612 ZNF274 GTRD no Cervix (HeLa-S3) 21341379
chr1 155192407 155197777 ZNF274 GTRD no Cervix (HeLa-S3) 21341385
chr1 155196324 155197753 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21341502
chr1 155196818 155198784 ZNF143 GTRD no Epithelial (MCF-7) 21341511
chr1 155196836 155197846 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21341514
chr1 155196958 155197618 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21341515
chr1 155196989 155197513 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21341517
chr1 155197277 155197787 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21341531
chr1 155197296 155197760 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21341532
chr1 155197331 155197715 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21341533
chr1 155197352 155197577 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21341534
chr1 155197355 155198005 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21341535
chr1 155197489 155197502 SMAD2 JASPAR yes 32337096
chr1 155197489 155197656 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21341536
Genes associated with rs542594830[chr1:155197502], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More