EnhancerDB
  1. Home
  2. SNP
  3. rs542597539[chr3:123315364]
Enhancers that have rs542597539[chr3:123315364]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 123311925 123328095 enh7496
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Stomach Muscle (A673) Placenta Colon (HCT116) Blood (Karpas-422) Lung (PC-9) Pancreas (Panc1) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs542597539[chr3:123315364]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 123315361 123315376 FOXP1 JASPAR yes 5328144
chr3 123315362 123315377 FOXP1 JASPAR yes 5328145
chr3 123315363 123315378 FOXP1 JASPAR yes 5328146
Genes associated with rs542597539[chr3:123315364], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More