EnhancerDB
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  3. rs542600465[chr12:53274436]
Enhancers that have rs542600465[chr12:53274436]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 53249369 53285465 enh14733
Bone Marrow (K562) Astrocyte Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs542600465[chr12:53274436]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 53274055 53274475 ZNF274 GTRD no Cervix (HeLa-S3) 21548054
chr12 53274075 53274477 ZNF274 GTRD no Liver (HepG2) 21548055
chr12 53274110 53274567 ZNF274 GTRD no Cervix (HeLa-S3) 21548059
chr12 53274427 53274447 RREB1 JASPAR yes 120958578
chr12 53274428 53274438 ZNF740 JASPAR yes 120958579
chr12 53274428 53274448 RREB1 JASPAR yes 120958580
chr12 53274428 53274449 ZNF263 JASPAR yes 120958581
chr12 53274429 53274439 ZNF740 JASPAR yes 120958582
chr12 53274429 53274443 PLAG1 JASPAR yes 120958583
chr12 53274430 53274450 RREB1 JASPAR yes 120958584
chr12 53274431 53274451 RREB1 JASPAR yes 120958585
chr12 53274432 53274452 RREB1 JASPAR yes 120958586
chr12 53274435 53274450 NR2C2 JASPAR yes 120958587
Genes associated with rs542600465[chr12:53274436], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More