EnhancerDB
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  3. rs542602867[chr1:208360098]
Enhancers that have rs542602867[chr1:208360098]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 208343485 208368555 enh12612
Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Cervix (HeLa-S3) Large Intestine Brain (SK-N-SH) Esophagus Bone (Osteoblast) Blood (GM12878) Stomach Placenta Thyroid Uterus Peripheral Blood (MM.1S) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Neural Stem Cells (H9) Thymus Heart
Transcript factors that have rs542602867[chr1:208360098]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 208360083 208360102 PAX5 JASPAR yes 34904902
chr1 208360093 208360110 PAX1 JASPAR yes 34904904
chr1 208360093 208360110 PAX9 JASPAR yes 34904905
Genes associated with rs542602867[chr1:208360098], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More