EnhancerDB
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  3. rs542622160[chr11:65896563]
Enhancers that have rs542622160[chr11:65896563]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr11 65889425 65921015 enh1832
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs542622160[chr11:65896563]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr11 65895205 65903996 ZNF274 GTRD no Bone Marrow (K562) 21496344
chr11 65895205 65903996 ZNF274 GTRD no Bone Marrow (K562) 107982361
chr11 65896556 65896566 HOXA13 JASPAR yes 39353716
chr11 65896556 65896566 HOXB13 JASPAR yes 39353717
chr11 65896556 65896566 HOXD13 JASPAR yes 39353718
chr11 65896556 65896567 HOXA10 JASPAR yes 39353719
chr11 65896557 65896566 CDX1 JASPAR yes 39353720
chr11 65896557 65896568 CDX2 JASPAR yes 39353721
chr11 65896563 65896575 POU2F1 JASPAR yes 39353722
chr11 65896563 65896576 POU3F3 JASPAR yes 39353723
chr11 65896563 65896577 POU1F1 JASPAR yes 39353724
Genes associated with rs542622160[chr11:65896563], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More