EnhancerDB
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  3. rs542624419[chr12:96828012]
Enhancers that have rs542624419[chr12:96828012]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 96795782 96855361 enh14922
Brain (SK-N-MC) Astrocyte Colon (HCT116) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Breast Spleen Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs542624419[chr12:96828012]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 96827839 96828435 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108053334
chr12 96827951 96828281 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108053335
chr12 96827997 96828012 FOXA1 JASPAR yes 123070784
chr12 96827998 96828013 FOXP1 JASPAR yes 123070786
chr12 96827999 96828013 ONECUT2 JASPAR yes 123070788
chr12 96827999 96828013 ONECUT3 JASPAR yes 123070789
chr12 96828004 96828015 PROP1 JASPAR yes 123070793
chr12 96828006 96828016 HOXD13 JASPAR yes 123070795
chr12 96828006 96828017 HOXA10 JASPAR yes 123070796
chr12 96828011 96828023 HNF1B JASPAR yes 123070797
Genes associated with rs542624419[chr12:96828012], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More