EnhancerDB
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  3. rs542641809[chr12:46952384]
Enhancers that have rs542641809[chr12:46952384]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 46935165 46958895 enh14680
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Uterus Blood (T-cell) Kidney Epithelial (MCF-7) Skin (Keratinocyte) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Breast Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs542641809[chr12:46952384]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 46951897 46952549 ZNF274 GTRD no Cervix (HeLa-S3) 21542601
chr12 46952375 46952390 MEF2A JASPAR yes 120637927
chr12 46952376 46952391 MEF2C JASPAR yes 120637928
chr12 46952377 46952389 MEF2A JASPAR yes 120637929
chr12 46952377 46952389 MEF2B JASPAR yes 120637930
chr12 46952377 46952389 MEF2D JASPAR yes 120637931
chr12 46952378 46952388 MEF2A JASPAR yes 120637932
chr12 46952379 46952391 MEF2A JASPAR yes 120637933
chr12 46952380 46952390 MEF2A JASPAR yes 120637934
chr12 46952380 46952391 FOXB1 JASPAR yes 120637935
chr12 46952380 46952391 FOXC1 JASPAR yes 120637936
chr12 46952381 46952385 YY1 TRANSFAC yes 120637937
Genes associated with rs542641809[chr12:46952384], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More