EnhancerDB
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  3. rs542646959[chr16:14401206]
Enhancers that have rs542646959[chr16:14401206]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 14391425 14410135 enh3904
Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Stomach Epithelial (MCF-7) Skin (Keratinocyte) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1)
Transcript factors that have rs542646959[chr16:14401206]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 14400330 14401254 AR GTRD no Prostate (PC-3) 21692391
chr16 14400745 14401345 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21692395
chr16 14401127 14402016 ZNF274 GTRD no Liver (HepG2) 21692398
chr16 14401138 14401734 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 21692399
chr16 14401197 14401215 NR3C1 JASPAR yes 9681230
chr16 14401206 14401210 NFE TRANSFAC yes 9681231
Genes associated with rs542646959[chr16:14401206], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More