EnhancerDB
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  3. rs542660641[chr17:65437560]
Enhancers that have rs542660641[chr17:65437560]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 65424869 65443995 enh17322
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Blood (OCI-LY7) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs542660641[chr17:65437560]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 65437214 65437584 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21782230
chr17 65437214 65437584 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108285859
chr17 65437342 65437622 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108285861
chr17 65437343 65437579 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21782232
chr17 65437343 65437579 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108285862
chr17 65437370 65437561 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108285863
chr17 65437384 65437571 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108285864
chr17 65437419 65437709 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108285865
chr17 65437473 65437608 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108285866
chr17 65437547 65437562 FOXA1 JASPAR yes 21279620
chr17 65437547 65437562 FOXA1 JASPAR yes 55504668
Genes associated with rs542660641[chr17:65437560], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More