EnhancerDB
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  3. rs542669953[chr6:12344045]
Enhancers that have rs542669953[chr6:12344045]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 12340945 12361575 enh38802
Astrocyte Colon (HCT116) Pancreas Stomach Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1)
Transcript factors that have rs542669953[chr6:12344045]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 12343445 12344467 EP300 UCSC Txn Factor no Conserved 108538543
chr6 12343499 12344451 TCF12 UCSC Txn Factor no Conserved 108538545
Genes associated with rs542669953[chr6:12344045], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More