EnhancerDB
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  3. rs542682252[chr1:155860893]
Enhancers that have rs542682252[chr1:155860893]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 155856385 155866134 enh12292
Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673)
Transcript factors that have rs542682252[chr1:155860893]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 155858797 155861096 STAT3 GTRD no Blood (OCI-LY7) 21341683
chr1 155859717 155860936 TCF7L2 GTRD no Colon (HCT116) 21341726
chr1 155860249 155860917 ZNF274 GTRD no Liver (HepG2) 21341731
chr1 155860277 155860975 ZNF274 GTRD no Liver (HepG2) 21341732
chr1 155860885 155860896 FOSL2 JASPAR yes 32366180
chr1 155860892 155860902 SP1 JASPAR yes 32366181
Genes associated with rs542682252[chr1:155860893], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More