EnhancerDB
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  3. rs542692936[chr1:8540183]
Enhancers that have rs542692936[chr1:8540183]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 8493665 8545435 enh43
Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs542692936[chr1:8540183]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 8540176 8540197 IRF1 JASPAR yes 26560474
chr1 8540177 8540198 IRF1 JASPAR yes 26560475
chr1 8540182 8540203 IRF1 JASPAR yes 26560476
chr1 8540183 8540189 TCF4 TRANSFAC yes 26560477
chr1 8540183 8540198 FOXP1 JASPAR yes 26560478
chr1 8540183 8540204 IRF1 JASPAR yes 26560479
Genes associated with rs542692936[chr1:8540183], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More