EnhancerDB
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  3. rs542718451[chr1:41341779]
Enhancers that have rs542718451[chr1:41341779]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 41333905 41349008 enh11777
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Bone (Osteoblast) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Heart
Transcript factors that have rs542718451[chr1:41341779]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 41341255 41343559 ZNF143 GTRD no Epithelial (MCF-7) 107802934
chr1 41341774 41341794 RREB1 JASPAR yes 28348981
chr1 41341775 41341795 RREB1 JASPAR yes 28348982
chr1 41341778 41341784 TCF4 TRANSFAC yes 28348983
chr1 41341778 41341790 FOXI1 JASPAR yes 28348984
chr1 41341778 41341793 FOXP1 JASPAR yes 28348985
chr1 41341778 41341798 RREB1 JASPAR yes 28348986
chr1 41341779 41341799 RREB1 JASPAR yes 28348987
Genes associated with rs542718451[chr1:41341779], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More