EnhancerDB
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  3. rs542721559[chr11:19986647]
Enhancers that have rs542721559[chr11:19986647]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr11 19970665 19987395 enh13835
Astrocyte Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Prostate (PC-3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs542721559[chr11:19986647]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr11 19986629 19986648 PITX2 TRANSFAC yes 37820111
chr11 19986635 19986648 ZBTB18 JASPAR yes 37820112
chr11 19986636 19986648 PKNOX1 JASPAR yes 37820113
chr11 19986636 19986648 TGIF1 JASPAR yes 37820114
chr11 19986637 19986647 FIGLA JASPAR yes 37820116
chr11 19986637 19986647 ID4 JASPAR yes 37820117
chr11 19986637 19986647 TCF3 JASPAR yes 37820118
chr11 19986637 19986647 TCF4 JASPAR yes 37820119
chr11 19986639 19986648 ZEB1 JASPAR yes 37820120
chr11 19986639 19986649 TBX21 JASPAR yes 37820121
chr11 19986640 19986648 MGA JASPAR yes 37820122
chr11 19986640 19986648 TBX15 JASPAR yes 37820123
chr11 19986640 19986648 TBX1 JASPAR yes 37820124
chr11 19986640 19986648 TBX4 JASPAR yes 37820125
chr11 19986640 19986648 TBX5 JASPAR yes 37820126
chr11 19986640 19986650 TBR1 JASPAR yes 37820127
chr11 19986640 19986653 SMAD2 JASPAR yes 37820128
Genes associated with rs542721559[chr11:19986647], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More