EnhancerDB
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  3. rs542731214[chr16:19823307]
Enhancers that have rs542731214[chr16:19823307]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 19808925 19825125 enh16597
Prostate (PC-3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Ovary Lung (PC-9) Lung Stomach Placenta Thyroid Uterus Peripheral Blood (MM.1S) Muscle (Myoblast) Pancreas Neural Stem Cells (H9) Blood (T-cell) Heart
Transcript factors that have rs542731214[chr16:19823307]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 19822231 19823974 TEF1 GTRD no Bone (Osteoblast) 108186545
chr16 19823301 19823322 IRF1 JASPAR yes 9885169
chr16 19823302 19823323 IRF1 JASPAR yes 9885170
chr16 19823304 19823325 IRF1 JASPAR yes 9885171
chr16 19823305 19823326 IRF1 JASPAR yes 9885172
chr16 19823306 19823321 FOXP1 JASPAR yes 9885173
chr16 19823306 19823327 IRF1 JASPAR yes 9885174
chr16 19823307 19823322 FOXP1 JASPAR yes 9885175
chr16 19823307 19823328 IRF1 JASPAR yes 9885176
Genes associated with rs542731214[chr16:19823307], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More