EnhancerDB
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  3. rs542747301[chr17:49030937]
Enhancers that have rs542747301[chr17:49030937]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 49015225 49039275 enh17224
Bone Marrow (K562) Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs542747301[chr17:49030937]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 49030925 49030937 NHLH1 JASPAR yes 54738651
chr17 49030927 49030946 REST JASPAR yes 54738653
chr17 49030928 49030947 REST JASPAR yes 54738654
chr17 49030931 49030940 THAP1 JASPAR yes 54738655
chr17 49030932 49030945 TFAP2A JASPAR yes 54738656
chr17 49030932 49030945 TFAP2B JASPAR yes 54738657
chr17 49030932 49030945 TFAP2C JASPAR yes 54738658
chr17 49030932 49030947 TFAP2A JASPAR yes 54738659
chr17 49030933 49030942 TFAP2A JASPAR yes 54738660
Genes associated with rs542747301[chr17:49030937], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More