EnhancerDB
  1. Home
  2. SNP
  3. rs542755820[chr3:57966896]
Enhancers that have rs542755820[chr3:57966896]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 57952365 57980395 enh7247
Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs542755820[chr3:57966896]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 57966893 57966908 FOXP1 JASPAR yes 2660349
chr3 57966894 57966909 FOXP1 JASPAR yes 2660350
chr3 57966895 57966910 FOXP1 JASPAR yes 2660351
chr3 57966895 57966916 IRF1 JASPAR yes 2660352
chr3 57966896 57966911 FOXP1 JASPAR yes 2660353
chr3 57966896 57966917 IRF1 JASPAR yes 2660354
Genes associated with rs542755820[chr3:57966896], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More