EnhancerDB
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  3. rs542758341[chr1:232772068]
Enhancers that have rs542758341[chr1:232772068]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 232744026 232773755 enh12786
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Large Intestine Esophagus Placenta Lung (PC-9) Spleen Lung Muscle (A673) Heart
Transcript factors that have rs542758341[chr1:232772068]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 232772062 232772083 IRF1 JASPAR yes 36180568
chr1 232772065 232772079 IRF7 JASPAR yes 36180569
chr1 232772066 232772081 FOXP1 JASPAR yes 36180570
Genes associated with rs542758341[chr1:232772068], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More