EnhancerDB
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  3. rs542770455[chr12:50909417]
Enhancers that have rs542770455[chr12:50909417]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 50906745 50954311 enh2346
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs542770455[chr12:50909417]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 50909412 50909433 ZNF263 JASPAR yes 120836556
chr12 50909414 50909435 IRF1 JASPAR yes 120836557
chr12 50909416 50909431 PRDM1 JASPAR yes 120836558
Genes associated with rs542770455[chr12:50909417], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More