EnhancerDB
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  3. rs542782549[chr11:126209469]
Enhancers that have rs542782549[chr11:126209469]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr11 126175745 126220415 enh14373
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myotube) Liver (HepG2) Lung Muscle (A673) Heart
chr11 126209269 126209556 vista12015
VISTA
Transcript factors that have rs542782549[chr11:126209469]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr11 126209279 126209783 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21521618
chr11 126209279 126209783 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108006061
chr11 126209336 126209600 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21521619
chr11 126209336 126209600 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108006062
chr11 126209468 126209479 NFKB1 JASPAR yes 42194536
chr11 126209468 126209479 NFKB1 JASPAR yes 114152199
chr11 126209469 126209479 NFKB1 JASPAR yes 42194537
chr11 126209469 126209479 RELA JASPAR yes 42194538
chr11 126209469 126209479 REL JASPAR yes 42194539
chr11 126209469 126209479 NFKB1 JASPAR yes 114152200
chr11 126209469 126209479 RELA JASPAR yes 114152201
chr11 126209469 126209479 REL JASPAR yes 114152202
chr11 126209469 126209480 NFKB1 JASPAR yes 42194540
chr11 126209469 126209480 NFKB1 JASPAR yes 114152203
Genes associated with rs542782549[chr11:126209469], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More