EnhancerDB
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  3. rs542787540[chr2:220853791]
Enhancers that have rs542787540[chr2:220853791]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 220850605 220868755 enh6163
Skin (Keratinocyte) Prostate (PC-3) Brain (SK-N-MC) Large Intestine Astrocyte Muscle (A673) Colon (HCT116) Thyroid Uterus Blood (Karpas-422) Lung (PC-9) Neural Stem Cells (H9) Thymus
Transcript factors that have rs542787540[chr2:220853791]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 220853780 220853796 SRF JASPAR yes 81066871
chr2 220853780 220853798 SRF JASPAR yes 81066872
chr2 220853781 220853793 SRF JASPAR yes 81066873
chr2 220853786 220853801 MEF2C JASPAR yes 81066875
chr2 220853787 220853802 MEF2A JASPAR yes 81066876
Genes associated with rs542787540[chr2:220853791], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More