EnhancerDB
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  3. rs542812427[chr1:201728204]
Enhancers that have rs542812427[chr1:201728204]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 201710292 201749335 enh12527
Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Esophagus Astrocyte Lung (A549) Stomach Muscle (A673) Placenta Thyroid Uterus Peripheral Blood (MM.1S) Lung (PC-9) Muscle (Myoblast) Neural Stem Cells (H9) Heart
Transcript factors that have rs542812427[chr1:201728204]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 201728201 201728213 TAL1 JASPAR yes 34529780
chr1 201728202 201728214 BHLHE23 JASPAR yes 34529781
chr1 201728203 201728213 BHLHE22 JASPAR yes 34529782
chr1 201728203 201728213 NEUROD2 JASPAR yes 34529783
chr1 201728203 201728213 NEUROG2 JASPAR yes 34529784
chr1 201728203 201728213 OLIG1 JASPAR yes 34529785
chr1 201728203 201728213 OLIG2 JASPAR yes 34529786
chr1 201728203 201728213 OLIG3 JASPAR yes 34529787
chr1 201728203 201728215 TAL1 JASPAR yes 34529788
Genes associated with rs542812427[chr1:201728204], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More