EnhancerDB
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  3. rs542815659[chr19:6098976]
Enhancers that have rs542815659[chr19:6098976]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 6084063 6113078 enh17886
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs542815659[chr19:6098976]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 6098969 6098980 RUNX1 JASPAR yes 112256822
chr19 6098972 6098992 RREB1 JASPAR yes 112256823
chr19 6098973 6098988 FOXP1 JASPAR yes 112256824
chr19 6098974 6098989 FOXP1 JASPAR yes 112256825
chr19 6098974 6098995 IRF1 JASPAR yes 112256826
chr19 6098975 6098990 FOXP1 JASPAR yes 112256827
chr19 6098975 6098996 IRF1 JASPAR yes 112256828
chr19 6098976 6098991 FOXP1 JASPAR yes 112256829
chr19 6098976 6098997 IRF1 JASPAR yes 112256830
Genes associated with rs542815659[chr19:6098976], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More