EnhancerDB
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  3. rs542823972[chr1:110425408]
Enhancers that have rs542823972[chr1:110425408]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 110412890 110446635 enh12129
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Adrenal Pancreas Uterus Blood (T-cell) Stomach Ovary Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs542823972[chr1:110425408]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 110425148 110425472 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21328227
chr1 110425170 110425480 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21328228
chr1 110425201 110425424 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21328229
chr1 110425207 110425597 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21328230
chr1 110425224 110425560 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21328231
chr1 110425238 110425428 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21328232
chr1 110425238 110425578 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21328233
chr1 110425243 110425543 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21328234
chr1 110425318 110425560 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21328235
chr1 110425333 110425551 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21328236
chr1 110425403 110425408 SP1 TRANSFAC yes 31449546
chr1 110425404 110425409 SP1 TRANSFAC yes 31449547
chr1 110425404 110425410 SP1 TRANSFAC yes 31449548
Genes associated with rs542823972[chr1:110425408], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More