EnhancerDB
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  3. rs542839560[chr5:149185253]
Enhancers that have rs542839560[chr5:149185253]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 149167853 149192675 enh8796
Bone Marrow (K562) Astrocyte Blood (Karpas-422) Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Breast Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs542839560[chr5:149185253]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 149185241 149185259 RARA JASPAR yes 66847278
chr5 149185243 149185254 FOSL2 JASPAR yes 66847279
Genes associated with rs542839560[chr5:149185253], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More