EnhancerDB
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  3. rs542854610[chr2:38934032]
Enhancers that have rs542854610[chr2:38934032]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 38916069 38955355 enh5435
Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Ovary Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs542854610[chr2:38934032]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 38934022 38934032 SP1 JASPAR yes 73167835
chr2 38934022 38934032 ZNF740 JASPAR yes 73167836
chr2 38934023 38934035 ZBTB7B JASPAR yes 73167837
chr2 38934023 38934035 ZBTB7C JASPAR yes 73167838
chr2 38934024 38934036 ZBTB7A JASPAR yes 73167839
chr2 38934032 38934047 MEF2C JASPAR yes 73167840
Genes associated with rs542854610[chr2:38934032], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More