EnhancerDB
  1. Home
  2. SNP
  3. rs542875147[chr17:65442531]
Enhancers that have rs542875147[chr17:65442531]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 65424869 65443995 enh17322
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Blood (OCI-LY7) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs542875147[chr17:65442531]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 65442519 65442534 FOXP1 JASPAR yes 55505386
chr17 65442519 65442534 MEF2C JASPAR yes 55505387
chr17 65442520 65442531 FOXP2 JASPAR yes 55505388
chr17 65442527 65442548 IRF1 JASPAR yes 55505390
chr17 65442528 65442543 FOXP1 JASPAR yes 55505391
chr17 65442531 65442552 IRF1 JASPAR yes 55505392
Genes associated with rs542875147[chr17:65442531], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More