EnhancerDB
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  3. rs542901981[chr19:10842976]
Enhancers that have rs542901981[chr19:10842976]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 10832365 10873258 enh5002
Bone Marrow (K562) Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs542901981[chr19:10842976]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 10842358 10843009 ZNF274 GTRD no Blood (GM12878) 21848915
chr19 10842358 10843009 ZNF274 GTRD no Blood (GM12878) 108383755
chr19 10842472 10843106 ZNF274 GTRD no Blood (GM12878) 21848919
chr19 10842472 10843106 ZNF274 GTRD no Blood (GM12878) 108383759
chr19 10842968 10842989 ZNF263 JASPAR yes 112432947
chr19 10842969 10842990 IRF1 JASPAR yes 112432948
chr19 10842971 10842992 IRF1 JASPAR yes 112432949
chr19 10842971 10842992 ZNF263 JASPAR yes 112432950
chr19 10842972 10842987 FOXP1 JASPAR yes 112432951
chr19 10842972 10842993 IRF1 JASPAR yes 112432952
chr19 10842973 10842988 FOXP1 JASPAR yes 112432953
chr19 10842973 10842994 IRF1 JASPAR yes 112432954
chr19 10842974 10842989 FOXP1 JASPAR yes 112432955
chr19 10842974 10842995 IRF1 JASPAR yes 112432956
chr19 10842975 10842990 FOXP1 JASPAR yes 112432957
chr19 10842975 10842996 IRF1 JASPAR yes 112432958
chr19 10842976 10842991 FOXP1 JASPAR yes 112432959
chr19 10842976 10842997 IRF1 JASPAR yes 112432960
Genes associated with rs542901981[chr19:10842976], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More