EnhancerDB
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  3. rs542911196[chr3:119863142]
Enhancers that have rs542911196[chr3:119863142]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 119860605 119883439 enh7479
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Stomach Epithelial (MCF-7) Skin (Keratinocyte) Bone (Osteoblast) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung
Transcript factors that have rs542911196[chr3:119863142]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 119863125 119863143 IRF2 JASPAR yes 5196024
chr3 119863139 119863153 PAX6 JASPAR yes 5196025
Genes associated with rs542911196[chr3:119863142], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More