EnhancerDB
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  3. rs542926090[chr16:89552241]
Enhancers that have rs542926090[chr16:89552241]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 89534745 89554855 enh32031
Liver Astrocyte Colon (HCT116) Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Lung (PC-9) Muscle (Myoblast) Breast Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs542926090[chr16:89552241]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 89552236 89552247 USF1 JASPAR yes 12350011
chr16 89552236 89552247 USF2 JASPAR yes 12350012
chr16 89552237 89552247 MAX JASPAR yes 12350013
Genes associated with rs542926090[chr16:89552241], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More