EnhancerDB
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  3. rs542933959[chr12:50909974]
Enhancers that have rs542933959[chr12:50909974]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 50906745 50954311 enh2346
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs542933959[chr12:50909974]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 50909960 50909974 TCF7L2 JASPAR yes 120836651
chr12 50909964 50909979 JUND JASPAR yes 120836652
chr12 50909966 50909984 RARA JASPAR yes 120836653
chr12 50909968 50909981 DUXA JASPAR yes 120836654
chr12 50909968 50909981 JUN JASPAR yes 120836655
chr12 50909968 50909982 RORA JASPAR yes 120836656
chr12 50909969 50909980 DUX4 JASPAR yes 120836657
chr12 50909972 50909982 EVX1 JASPAR yes 120836658
chr12 50909972 50909982 EVX2 JASPAR yes 120836659
Genes associated with rs542933959[chr12:50909974], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More