EnhancerDB
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  3. rs542936555[chr1:178608352]
Enhancers that have rs542936555[chr1:178608352]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 178606845 178636895 enh759
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Large Intestine Ovary Esophagus Astrocyte Blood (OCI-LY7) Stomach Placenta Blood (Karpas-422) Lung (PC-9) Spleen Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs542936555[chr1:178608352]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 178606867 178609241 STAT3 GTRD no Blood (OCI-LY7) 21352763
chr1 178608341 178608357 E2F2 JASPAR yes 33431624
chr1 178608352 178608359 NFATC2 JASPAR yes 33431625
Genes associated with rs542936555[chr1:178608352], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More