EnhancerDB
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  3. rs542946878[chr1:27924702]
Enhancers that have rs542946878[chr1:27924702]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 27879543 27929405 enh11668
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Lung Muscle (A673) Heart
chr1 27924687 27925144 vista934
VISTA
Transcript factors that have rs542946878[chr1:27924702]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 27924701 27924706 SP1 TRANSFAC yes 27714478
chr1 27924701 27924706 SP1 TRANSFAC yes 118258880
Genes associated with rs542946878[chr1:27924702], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More