EnhancerDB
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  3. rs542972409[chr6:31025434]
Enhancers that have rs542972409[chr6:31025434]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 31022954 31045508 enh38944
Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Ovary Bone (Osteoblast) Muscle (A673) Colon (HCT116) Thyroid Uterus Lung (PC-9) Breast Spleen Muscle (Myotube) Neural Stem Cells (H9) Stomach
Transcript factors that have rs542972409[chr6:31025434]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 31025430 31025435 SP1 TRANSFAC yes 101069070
chr6 31025430 31025444 PLAG1 JASPAR yes 101069071
chr6 31025434 31025438 H1TF2 TRANSFAC yes 101069072
chr6 31025434 31025438 NFE TRANSFAC yes 101069073
chr6 31025434 31025438 SRF TRANSFAC yes 101069074
Genes associated with rs542972409[chr6:31025434], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More