EnhancerDB
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  3. rs542977658[chr2:26275442]
Enhancers that have rs542977658[chr2:26275442]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 26273785 26313195 enh5372
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Blood (T-cell) Kidney Stomach Skin (Keratinocyte) Epithelial (MCF-7) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs542977658[chr2:26275442]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 26275437 26275448 USF1 JASPAR yes 72519126
chr2 26275437 26275448 USF2 JASPAR yes 72519127
chr2 26275440 26275445 USF2 TRANSFAC yes 72519128
Genes associated with rs542977658[chr2:26275442], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More