EnhancerDB
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  3. rs543005446[chr6:11598707]
Enhancers that have rs543005446[chr6:11598707]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 11583745 11623555 enh23028
Brain (SK-N-MC) Astrocyte Uterus Kidney Epithelial (MCF-7) Stomach Ovary Bone (Osteoblast) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Lung Muscle (A673) Heart
Transcript factors that have rs543005446[chr6:11598707]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 11598695 11598710 TFAP2C JASPAR yes 99898776
chr6 11598697 11598709 INSM1 JASPAR yes 99898777
chr6 11598697 11598709 TFAP2A JASPAR yes 99898778
chr6 11598697 11598709 TFAP2B JASPAR yes 99898779
chr6 11598697 11598709 TFAP2C JASPAR yes 99898780
chr6 11598697 11598712 TFAP2A JASPAR yes 99898781
chr6 11598699 11598708 TFAP2A JASPAR yes 99898782
Genes associated with rs543005446[chr6:11598707], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More