EnhancerDB
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  3. rs543033550[chr6:25173046]
Enhancers that have rs543033550[chr6:25173046]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 25163505 25184315 enh23129
Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs543033550[chr6:25173046]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 25173032 25173047 NR2C2 JASPAR yes 100831240
chr6 25173035 25173055 RREB1 JASPAR yes 100831246
chr6 25173036 25173046 SP1 JASPAR yes 100831247
chr6 25173036 25173046 ZNF740 JASPAR yes 100831248
chr6 25173037 25173047 SP1 JASPAR yes 100831249
chr6 25173037 25173047 ZNF740 JASPAR yes 100831250
chr6 25173037 25173057 RREB1 JASPAR yes 100831251
chr6 25173038 25173048 ZNF740 JASPAR yes 100831252
chr6 25173039 25173049 ZNF740 JASPAR yes 100831253
Genes associated with rs543033550[chr6:25173046], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More