EnhancerDB
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  3. rs543035706[chr16:89542471]
Enhancers that have rs543035706[chr16:89542471]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 89534745 89554855 enh32031
Liver Astrocyte Colon (HCT116) Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Lung (PC-9) Muscle (Myoblast) Breast Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs543035706[chr16:89542471]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 89542456 89542471 FOXP1 JASPAR yes 12348568
chr16 89542457 89542472 FOXP1 JASPAR yes 12348569
chr16 89542458 89542473 FOXP1 JASPAR yes 12348570
chr16 89542458 89542479 IRF1 JASPAR yes 12348571
chr16 89542459 89542474 FOXP1 JASPAR yes 12348572
chr16 89542459 89542480 IRF1 JASPAR yes 12348573
chr16 89542460 89542475 FOXP1 JASPAR yes 12348574
chr16 89542462 89542477 FOXP1 JASPAR yes 12348575
chr16 89542463 89542484 IRF1 JASPAR yes 12348576
chr16 89542464 89542479 FOXP1 JASPAR yes 12348577
chr16 89542464 89542485 IRF1 JASPAR yes 12348578
chr16 89542465 89542486 IRF1 JASPAR yes 12348579
chr16 89542469 89542484 PRDM1 JASPAR yes 12348580
chr16 89542469 89542490 IRF1 JASPAR yes 12348581
chr16 89542470 89542485 FOXP1 JASPAR yes 12348582
chr16 89542470 89542491 IRF1 JASPAR yes 12348583
chr16 89542471 89542486 IRF9 JASPAR yes 12348584
Genes associated with rs543035706[chr16:89542471], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More