EnhancerDB
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  3. rs543039905[chr1:41268471]
Enhancers that have rs543039905[chr1:41268471]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 41258745 41277518 enh278
Bone Marrow (K562) Large Intestine Prostate (RWPE1) Blood (T-cell) Bone (Osteoblast) Blood (OCI-LY7) Stomach Muscle (A673) Placenta Colon (HCT116) Uterus Peripheral Blood (MM.1S) Blood (Karpas-422) Pancreas Pancreas (Panc1) Neural Stem Cells (H9) Thymus Heart
Transcript factors that have rs543039905[chr1:41268471]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 41268456 41268475 PAX5 JASPAR yes 28344825
chr1 41268457 41268474 RARA JASPAR yes 28344826
chr1 41268457 41268474 RXRA JASPAR yes 28344827
chr1 41268462 41268473 EBF1 JASPAR yes 28344828
chr1 41268466 41268479 NFKB1 JASPAR yes 28344829
chr1 41268466 41268479 NFKB2 JASPAR yes 28344830
chr1 41268468 41268479 NFKB1 JASPAR yes 28344831
Genes associated with rs543039905[chr1:41268471], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More