EnhancerDB
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  3. rs543040636[chr1:201721751]
Enhancers that have rs543040636[chr1:201721751]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 201710292 201749335 enh12527
Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Esophagus Astrocyte Lung (A549) Stomach Muscle (A673) Placenta Thyroid Uterus Peripheral Blood (MM.1S) Lung (PC-9) Muscle (Myoblast) Neural Stem Cells (H9) Heart
Transcript factors that have rs543040636[chr1:201721751]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 201721732 201721753 IRF1 JASPAR yes 34528693
chr1 201721736 201721751 FOXP1 JASPAR yes 34528694
chr1 201721737 201721752 FOXP1 JASPAR yes 34528695
chr1 201721738 201721753 FOXP1 JASPAR yes 34528696
chr1 201721739 201721754 FOXP1 JASPAR yes 34528697
chr1 201721741 201721756 FOXP1 JASPAR yes 34528698
chr1 201721747 201721757 HOXD13 JASPAR yes 34528699
chr1 201721747 201721758 HOXA10 JASPAR yes 34528700
chr1 201721748 201721758 GBX2 JASPAR yes 34528701
chr1 201721748 201721758 GSX2 JASPAR yes 34528702
chr1 201721748 201721758 HOXB3 JASPAR yes 34528703
chr1 201721748 201721758 MNX1 JASPAR yes 34528704
chr1 201721748 201721758 RAX JASPAR yes 34528705
chr1 201721749 201721757 BARX1 JASPAR yes 34528706
chr1 201721749 201721757 BSX JASPAR yes 34528707
chr1 201721749 201721757 ISL2 JASPAR yes 34528708
chr1 201721749 201721757 LMX1B JASPAR yes 34528709
chr1 201721749 201721757 MSX1 JASPAR yes 34528710
chr1 201721749 201721757 MSX2 JASPAR yes 34528711
chr1 201721749 201721758 VENTX JASPAR yes 34528712
Genes associated with rs543040636[chr1:201721751], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More