EnhancerDB
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  3. rs543042393[chr2:28883517]
Enhancers that have rs543042393[chr2:28883517]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 28854725 28893200 enh18394
Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs543042393[chr2:28883517]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 28883505 28883517 GRHL1 JASPAR yes 72665827
chr2 28883508 28883528 RREB1 JASPAR yes 72665829
chr2 28883509 28883529 RREB1 JASPAR yes 72665830
chr2 28883512 28883532 RREB1 JASPAR yes 72665831
chr2 28883513 28883533 RREB1 JASPAR yes 72665832
chr2 28883516 28883522 TCF4 TRANSFAC yes 72665833
chr2 28883516 28883528 FOXI1 JASPAR yes 72665834
chr2 28883516 28883531 FOXP1 JASPAR yes 72665835
chr2 28883516 28883536 RREB1 JASPAR yes 72665836
chr2 28883517 28883537 RREB1 JASPAR yes 72665837
Genes associated with rs543042393[chr2:28883517], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More