EnhancerDB
  1. Home
  2. SNP
  3. rs543088542[chr17:55974490]
Enhancers that have rs543088542[chr17:55974490]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 55962618 55979623 enh17245
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Lung (PC-9) Esophagus Astrocyte Bone (Osteoblast) Lung Blood (GM12878) Stomach Placenta Colon (HCT116) Uterus Thyroid Adrenal Muscle (Myoblast) Pancreas Neural Stem Cells (H9) Heart
Transcript factors that have rs543088542[chr17:55974490]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 55974482 55974492 MNX1 JASPAR yes 54996397
chr17 55974482 55974494 MEF2B JASPAR yes 54996398
chr17 55974482 55974494 MEF2D JASPAR yes 54996399
Genes associated with rs543088542[chr17:55974490], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More