EnhancerDB
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  3. rs543197090[chr12:104851958]
Enhancers that have rs543197090[chr12:104851958]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 104847485 104931455 enh14946
Bone Marrow (K562) Prostate (PC-3) Brain (SK-N-SH) Brain (SK-N-MC) Blood (T-cell) Esophagus Astrocyte Blood (OCI-LY7) Blood (GM12878) Stomach Placenta Peripheral Blood (MM.1S) Uterus Embryonic Stem Cell Line (H1-hESC) Lung (PC-9) Spleen Neural Stem Cells (H9) Thymus Epithelial (MCF-7)
Transcript factors that have rs543197090[chr12:104851958]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 104851948 104851960 TFAP2A JASPAR yes 123377714
chr12 104851948 104851960 TFAP2B JASPAR yes 123377715
chr12 104851948 104851960 TFAP2C JASPAR yes 123377716
chr12 104851948 104851963 TFAP2A JASPAR yes 123377717
chr12 104851949 104851958 TFAP2A JASPAR yes 123377718
chr12 104851957 104851961 H4TF2 TRANSFAC yes 123377719
Genes associated with rs543197090[chr12:104851958], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More