EnhancerDB
  1. Home
  2. SNP
  3. rs543239451[chr12:50965331]
Enhancers that have rs543239451[chr12:50965331]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 50954380 50971535 enh2347
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Uterus Epithelial (MCF-7) Stomach Thyroid Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Breast Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs543239451[chr12:50965331]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 50965325 50965346 IRF1 JASPAR yes 120845632
chr12 50965326 50965347 IRF1 JASPAR yes 120845633
chr12 50965328 50965349 IRF1 JASPAR yes 120845634
chr12 50965329 50965350 IRF1 JASPAR yes 120845635
chr12 50965330 50965345 FOXP1 JASPAR yes 120845636
chr12 50965330 50965351 IRF1 JASPAR yes 120845637
chr12 50965331 50965346 FOXP1 JASPAR yes 120845638
chr12 50965331 50965352 IRF1 JASPAR yes 120845639
Genes associated with rs543239451[chr12:50965331], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More