EnhancerDB
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  3. rs543246990[chr17:60163934]
Enhancers that have rs543246990[chr17:60163934]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 60161225 60181195 enh32257
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Lung (PC-9) Colon (HCT116) Peripheral Blood (MM.1S) Muscle (Myoblast) Pancreas Spleen Neural Stem Cells (H9) Stomach
Transcript factors that have rs543246990[chr17:60163934]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 60159781 60164099 TCF7L2 GTRD no Colon (HCT116) 21777616
chr17 60161091 60163986 TCF7L2 GTRD no Colon (HCT116) 21777619
chr17 60162917 60164011 ZNF274 GTRD no Liver (HepG2) 21777633
chr17 60162927 60163960 ZNF274 GTRD no Liver (HepG2) 21777634
chr17 60163009 60163954 ZNF274 GTRD no Liver (HepG2) 21777639
chr17 60163023 60164229 TCF7L2 GTRD no Colon (HCT116) 21777641
chr17 60163076 60164160 AR GTRD no Prostate (PC-3) 21777646
chr17 60163925 60163941 T JASPAR yes 55180335
chr17 60163929 60163941 HES5 JASPAR yes 55180336
chr17 60163929 60163941 HES7 JASPAR yes 55180337
chr17 60163929 60163941 PKNOX2 JASPAR yes 55180338
chr17 60163929 60163949 TP63 JASPAR yes 55180339
Genes associated with rs543246990[chr17:60163934], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More