EnhancerDB
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  3. rs543330218[chr1:230204410]
Enhancers that have rs543330218[chr1:230204410]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 230203175 230225395 enh12769
Astrocyte Colon (HCT116) Pancreas Stomach Epithelial (MCF-7) Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
chr1 230203814 230204638 vista5485
VISTA
Transcript factors that have rs543330218[chr1:230204410]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 230204069 230204439 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107878307
chr1 230204372 230206800 ZNF274 GTRD no Bone Marrow (K562) 107878308
chr1 230204404 230204410 TCF4 TRANSFAC yes 36017871
chr1 230204404 230204410 TCF4 TRANSFAC yes 118477263
Genes associated with rs543330218[chr1:230204410], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More