EnhancerDB
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  3. rs543339162[chr5:172165449]
Enhancers that have rs543339162[chr5:172165449]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 172156284 172181075 enh22815
Liver Astrocyte Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Ovary Bone (Osteoblast) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs543339162[chr5:172165449]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 172165440 172165449 SNAI2 JASPAR yes 67820203
chr5 172165440 172165450 ID4 JASPAR yes 67820204
chr5 172165440 172165450 TCF3 JASPAR yes 67820205
chr5 172165440 172165450 TCF4 JASPAR yes 67820206
chr5 172165445 172165454 HIC2 JASPAR yes 67820207
Genes associated with rs543339162[chr5:172165449], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More