EnhancerDB
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  3. rs543358629[chr2:26276909]
Enhancers that have rs543358629[chr2:26276909]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 26273785 26313195 enh5372
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Blood (T-cell) Kidney Stomach Skin (Keratinocyte) Epithelial (MCF-7) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs543358629[chr2:26276909]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 26276898 26276919 IRF1 JASPAR yes 72519322
chr2 26276901 26276922 IRF1 JASPAR yes 72519323
chr2 26276902 26276923 IRF1 JASPAR yes 72519324
chr2 26276903 26276924 IRF1 JASPAR yes 72519325
chr2 26276904 26276919 FOXP1 JASPAR yes 72519326
chr2 26276906 26276921 FOXP1 JASPAR yes 72519327
chr2 26276907 26276922 FOXP1 JASPAR yes 72519328
chr2 26276907 26276928 IRF1 JASPAR yes 72519329
chr2 26276908 26276923 FOXP1 JASPAR yes 72519330
chr2 26276908 26276929 IRF1 JASPAR yes 72519331
chr2 26276909 26276924 FOXP1 JASPAR yes 72519332
chr2 26276909 26276930 IRF1 JASPAR yes 72519333
Genes associated with rs543358629[chr2:26276909], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More