EnhancerDB
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  3. rs543389129[chr16:85357176]
Enhancers that have rs543389129[chr16:85357176]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 85333005 85372015 enh16866
Bone Marrow (K562) Brain (SK-N-MC) Liver Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs543389129[chr16:85357176]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 85356028 85357863 ZNF143 GTRD no Epithelial (MCF-7) 21723518
chr16 85356028 85357863 ZNF143 GTRD no Epithelial (MCF-7) 108213811
chr16 85356040 85357907 TCF7L2 GTRD no Colon (HCT116) 21723519
chr16 85356040 85357907 TCF7L2 GTRD no Colon (HCT116) 108213812
chr16 85356056 85357821 ZNF143 GTRD no Epithelial (MCF-7) 21723520
chr16 85356056 85357821 ZNF143 GTRD no Epithelial (MCF-7) 108213813
chr16 85356754 85357777 TCF7L2 GTRD no Colon (HCT116) 21723526
chr16 85356821 85357847 ZNF143 GTRD no Epithelial (MCF-7) 21723527
chr16 85356833 85357831 ZNF274 GTRD no Bone Marrow (K562) 21723528
chr16 85356884 85357563 ZNF143 GTRD no Epithelial (MCF-7) 21723529
chr16 85356924 85357233 ZNF274 GTRD no Bone Marrow (K562) 21723530
chr16 85356949 85357732 ZNF274 GTRD no Bone Marrow (K562) 21723531
chr16 85357134 85357840 TCF7L2 GTRD no Colon (HCT116) 21723532
chr16 85357156 85357176 RREB1 JASPAR yes 12047347
chr16 85357173 85357177 LFA1 TRANSFAC yes 12047349
Genes associated with rs543389129[chr16:85357176], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More